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2014_workshop [2014/10/09 14:37] fmichel [Thematic sessions] |
2014_workshop [2014/10/13 14:37] johan [Friday, October the 10th, 2014] |
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=== 14:30 - 17:30, Session 1: Biomedical data federation in practice: feedback on existing approaches === | === 14:30 - 17:30, Session 1: Biomedical data federation in practice: feedback on existing approaches === | ||
* Camille Maumet (University of Warwick, UK): {{::2014_01_camille_maumet_credible_workshop.pdf|Supporting image-based meta-analysis with NIDM: Standardised reporting of neuroimaging results}} | * Camille Maumet (University of Warwick, UK): {{::2014_01_camille_maumet_credible_workshop.pdf|Supporting image-based meta-analysis with NIDM: Standardised reporting of neuroimaging results}} | ||
- | * Silvia Olabarriaga, (Amsterdam Medical Center, NL): Challenges for services integration into science gateways: the local story of the AMC | + | * Silvia Olabarriaga, (Amsterdam Medical Center, NL): {{::2014_02_credible-olabarriaga.pdf|Challenges for services integration into science gateways: the local story of the AMC}} |
* Pascal Neveu (INRA Montpellier, FR): {{::2014_03_neveu.pdf|From Gene To The Bottle}} | * Pascal Neveu (INRA Montpellier, FR): {{::2014_03_neveu.pdf|From Gene To The Bottle}} | ||
- | * Frédérique Segond (Viseo, FR): Language and knowledge technologies to properly model textual medical data and support better reasoning | + | * Frédérique Segond (Viseo, FR): {{::2014_04_pre_sentationcredible2014_last.pdf|Language and knowledge technologies to properly model textual medical data and support better reasoning}} |
* Panel discussion | * Panel discussion | ||
==== Thursday, October the 9th, 2014 ==== | ==== Thursday, October the 9th, 2014 ==== | ||
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* Harald Sack (U. Potsdam, DE): [[http://de.slideshare.net/lysander07/exploratory-search-based-on-linked-open-data|The Journey is the Reward - Exploratory Semantic Search based on Linked Data]] | * Harald Sack (U. Potsdam, DE): [[http://de.slideshare.net/lysander07/exploratory-search-based-on-linked-open-data|The Journey is the Reward - Exploratory Semantic Search based on Linked Data]] | ||
- | * Martin Peters (U. Dortmund, DE): Rule-based reasoning using GPUs | + | * Martin Peters (U. Dortmund, DE): {{::2014_06_peters_credible_2014.pdf|Rule-based reasoning using GPUs}} |
* Guy Melançon (U. Bordeaux): {{::2014_07_reasoning_with_graphs.pdf|Visual Analytics Supporting Rule Based Modeling}} | * Guy Melançon (U. Bordeaux): {{::2014_07_reasoning_with_graphs.pdf|Visual Analytics Supporting Rule Based Modeling}} | ||
* Christian De Sainte Marie (IBM): Business rules engines | * Christian De Sainte Marie (IBM): Business rules engines | ||
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* Ruben Verborgh (Ghent University): [[http://www.slideshare.net/RubenVerborgh/querying-data-on-the-web-client-or-server|Querying data on the Web – client or server?]] | * Ruben Verborgh (Ghent University): [[http://www.slideshare.net/RubenVerborgh/querying-data-on-the-web-client-or-server|Querying data on the Web – client or server?]] | ||
- | * Ester Pacitti (U. Montpellier 2 / INRIA, FR): Profile Diversity for Query Processing using Users Recommendations | + | * Ester Pacitti (U. Montpellier 2 / INRIA, FR): {{::2014_10_pacitti-credible.pdf|Profile Diversity for Query Processing using Users Recommendations}} |
- | * Axel-Cyrille Ngonga Ngomo (U. Leipzig): HIBISCUS: hypergraph-based sources selection for federated SPARQL queries | + | * Axel-Cyrille Ngonga Ngomo (U. Leipzig): {{::2014_11_hibiscuscredible.pdf|HIBISCUS: hypergraph-based sources selection for federated SPARQL queries}} |
* Panel discussion | * Panel discussion | ||
=== 15:30 - 17:30, Session 4: Data mediation === | === 15:30 - 17:30, Session 4: Data mediation === | ||
- | * Pascal Molli (U. Nantes, FR): Towards Writable and Scalable Linked Open Data | + | * Pascal Molli (U. Nantes, FR): {{::2014_12_credible2014.pptx|Towards Writable and Scalable Linked Open Data}} |
- | * Franck Michel (CNRS, FR): xR2RML, an R2RML extension for the translation of non-relational databases into RDF | + | * Franck Michel (CNRS, FR): {{:michel_-_an_r2rml_extension_for_the_translation_of_non-relational_databases_to_rdf.pdf|xR2RML, an R2RML extension for the translation of non-relational databases into RDF}} |
- | * Freddy Priyatna (U. Polytechnic Madrid, SP): An Overview of the Research Carried Out at Data Integration Group - OEG | + | * Freddy Priyatna (U. Polytechnic Madrid, SP): {{::2014_14_fpriyatna-credible2014.pdf|An Overview of the Research Carried Out at Data Integration Group - OEG}} |
* Panel discussion | * Panel discussion | ||
==== Friday, October the 10th, 2014 ==== | ==== Friday, October the 10th, 2014 ==== | ||
- | === 9:00 - 12:00, Session 5: Biomedical ontologies === | + | === 9:00 - 11:30, Session 5: Biomedical ontologies === |
- | * Simon Jupp (EBI, UK): BiomedBridges project | + | * Simon Jupp (EBI, UK): {{::2014_15_cmpo-credible-2014.pdf|BiomedBridges project}} |
- | * Heiner Oberkampf (Siemens, DE): Expressing Medical Image Measurements using Open Biological and Biomedical Ontologies | + | * Heiner Oberkampf (Siemens, DE): {{::2014_16_expressing_medical_image_measurements_using_obo_ontologies.pdf|Expressing Medical Image Measurements using Open Biological and Biomedical Ontologies}} |
* Alan Ruttenberg (University at Buffalo, School of Dental Medicine, USA): What should the role of biomedical ontology in imaging be? | * Alan Ruttenberg (University at Buffalo, School of Dental Medicine, USA): What should the role of biomedical ontology in imaging be? | ||
- | * Bernard Gibaud (INSERM, FR): ontology modelling needs for image biomarkers description | + | * Bernard Gibaud (INSERM, FR): {{::2014_18_bernard-gibaud-crediblev2.pdf|Ontology modelling needs for image biomarkers description}} |
* Panel discussion | * Panel discussion | ||
=== Workshop conclusions === | === Workshop conclusions === | ||
- | * 12:00, Johan Montagnat (CNRS, FR) | + | * 11:30, Johan Montagnat (CNRS, FR) |
====== Abstracts ====== | ====== Abstracts ====== |